Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HHT355_1835 | Not Available | Negative | 2053388 - 2054071 | 25600.1 |
| regulatory protein vanr | HHT355_1836 | Not Available | Positive | 2054313 - 2054984 | 25737.3 |
| hypothetical protein | HHT355_1837 | Not Available | Positive | 2054977 - 2056131 | 44342.9 |
| hypothetical protein | HHT355_1838 | Not Available | Positive | 2056240 - 2057790 | 60033.1 |
| hypothetical protein | HHT355_1839 | Not Available | Positive | 2057839 - 2058063 | 7870.32 |
| hypothetical protein | HHT355_1840 | Not Available | Positive | 2058153 - 2059037 | 33728.7 |
| putative membrane protein | HHT355_1841 | Not Available | Positive | 2059034 - 2060263 | 46859.6 |
| 4-alpha-glucanotransferase | HHT355_1842 | Not Available | Negative | 2060645 - 2062126 | 57393.8 |
| hypothetical protein | HHT355_1843 | Not Available | Negative | 2062322 - 2064073 | 67002.7 |
| putative membrane protein | HHT355_1844 | Not Available | Negative | 2064089 - 2064946 | 32825.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
