Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative membrane protein | HHT355_1825 | Not Available | Negative | 2040018 - 2041082 | 37580.6 |
| putative abc transporter atp-binding protein ytfr | HHT355_1826 | Not Available | Negative | 2041075 - 2042607 | 56875.2 |
| abc transporter periplasmic-binding protein ytfq | HHT355_1827 | Not Available | Negative | 2042786 - 2043805 | 37450.4 |
| hypothetical protein | HHT355_1828 | Not Available | Negative | 2043988 - 2045442 | 56124.4 |
| hypothetical protein | HHT355_1829 | Not Available | Negative | 2045427 - 2047076 | 64461.5 |
| putative membrane protein | HHT355_1830 | Not Available | Negative | 2047445 - 2047771 | 12435.1 |
| hypothetical protein | HHT355_1831 | Not Available | Negative | 2047926 - 2048762 | 31424.4 |
| hypothetical protein | HHT355_1832 | Not Available | Negative | 2049121 - 2051673 | 95225.8 |
| hypothetical protein | HHT355_1833 | Not Available | Negative | 2051663 - 2052352 | 25059.3 |
| putative membrane protein | HHT355_1834 | Not Available | Negative | 2052468 - 2053385 | 34667.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
