Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HHT355_1805 | Not Available | Negative | 2019812 - 2020567 | 28023.5 |
| hypothetical protein | HHT355_1806 | Not Available | Negative | 2020782 - 2021294 | 19958.1 |
| oligopeptide transport system permease protein appc | HHT355_1807 | Not Available | Negative | 2021696 - 2022580 | 31933.8 |
| putative membrane protein | HHT355_1808 | Not Available | Negative | 2022637 - 2023584 | 34384.7 |
| oligopeptide transport atp-binding protein appf | HHT355_1809 | Not Available | Negative | 2023577 - 2024632 | 39215.9 |
| putative peptide abc transporter atp-binding protein y4tr | HHT355_1810 | Not Available | Negative | 2024625 - 2025608 | 36633.1 |
| hypothetical protein | HHT355_1811 | Not Available | Negative | 2025713 - 2027374 | 61112.3 |
| hypothetical protein | HHT355_1812 | Not Available | Negative | 2027530 - 2028024 | 19371.3 |
| putative membrane protein | HHT355_1813 | Not Available | Negative | 2028236 - 2029582 | 49587.0 |
| putative membrane protein | HHT355_1814 | Not Available | Negative | 2029739 - 2031025 | 46828.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
