Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HHT355_1795 | Not Available | Negative | 2006668 - 2008422 | 66943.7 |
| hypothetical protein | HHT355_1796 | Not Available | Negative | 2008419 - 2008916 | 18676.7 |
| hypothetical protein | HHT355_1797 | Not Available | Negative | 2009360 - 2009962 | 22848.2 |
| hypothetical protein | HHT355_1798 | Not Available | Positive | 2010233 - 2010724 | 19041.4 |
| hypothetical protein | HHT355_1799 | Not Available | Negative | 2010875 - 2013526 | 100159.0 |
| putative abc transporter atp-binding protein mj0796 | HHT355_1800 | Not Available | Negative | 2013523 - 2014206 | 25263.7 |
| hypothetical protein | HHT355_1801 | Not Available | Negative | 2014398 - 2015402 | 37839.5 |
| hypothetical protein | HHT355_1802 | Not Available | Negative | 2015417 - 2016151 | 27712.5 |
| oligo-1,6-glucosidase | HHT355_1803 | Not Available | Negative | 2016397 - 2018295 | 74009.1 |
| n-acetyl-gamma-glutamyl-phosphate reductase 2 | HHT355_1804 | Not Available | Negative | 2018575 - 2019561 | 36725.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
