Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HHT355_1785 | Not Available | Positive | 1994381 - 1995361 | 37081.9 |
| histidine-trna ligase | HHT355_1786 | Not Available | Negative | 1995470 - 1996732 | 47577.1 |
| hypothetical protein | HHT355_1787 | Not Available | Negative | 1996979 - 1998457 | 56535.3 |
| hypothetical protein | HHT355_1788 | Not Available | Negative | 1998490 - 1999119 | 23624.1 |
| gtp pyrophosphokinase | HHT355_1789 | Not Available | Negative | 1999193 - 2001484 | 86201.0 |
| adenine phosphoribosyltransferase | HHT355_1790 | Not Available | Negative | 2001560 - 2002078 | 19155.6 |
| hypothetical protein | HHT355_1791 | Not Available | Negative | 2002205 - 2003962 | 66120.5 |
| hypothetical protein | HHT355_1792 | Not Available | Negative | 2003972 - 2004607 | 23944.8 |
| degv domain-containing protein cpe0026 | HHT355_1793 | Not Available | Positive | 2005048 - 2005917 | 32399.1 |
| hypothetical protein | HHT355_1794 | Not Available | Negative | 2006165 - 2006374 | 7579.15 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
