Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HHT355_0099 | Not Available | Positive | 103291 - 104781 | 56770.6 |
| hypothetical protein | HHT355_0100 | Not Available | Positive | 104798 - 106297 | 57119.2 |
| hypothetical protein | HHT355_0101 | Not Available | Positive | 106384 - 107490 | 41343.0 |
| hypothetical protein | HHT355_0102 | Not Available | Positive | 107553 - 108392 | 32237.7 |
| hypothetical protein | HHT355_0103 | Not Available | Negative | 108565 - 109743 | 43998.2 |
| sucrose phosphorylase | HHT355_0104 | Not Available | Negative | 109818 - 111278 | 56877.7 |
| putative membrane protein | HHT355_0105 | Not Available | Negative | 111294 - 112175 | 33442.7 |
| putative membrane protein | HHT355_0106 | Not Available | Negative | 112194 - 113132 | 35630.2 |
| putative secreted protein | HHT355_0107 | Not Available | Positive | 113459 - 115045 | 58591.9 |
| putative membrane protein | HHT355_0108 | Not Available | Positive | 115275 - 116441 | 41619.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
