Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HHT355_1694 | Not Available | Negative | 1908498 - 1910198 | 66863.4 |
| hypothetical protein | HHT355_1695 | Not Available | Positive | 1910383 - 1911768 | 51945.9 |
| putative membrane protein | HHT355_1696 | Not Available | Positive | 1912172 - 1912732 | 20584.3 |
| hypothetical protein | HHT355_1697 | Not Available | Negative | 1912958 - 1913488 | 20799.0 |
| aldehyde-alcohol dehydrogenase | HHT355_1698 | Not Available | Positive | 1913900 - 1916530 | 96165.5 |
| hypothetical protein | HHT355_1699 | Not Available | Positive | 1916730 - 1917482 | 28893.1 |
| hypothetical protein | HHT355_1700 | Not Available | Negative | 1917651 - 1918496 | 31261.8 |
| methylmalonate semialdehyde dehydrogenase | HHT355_1701 | Not Available | Negative | 1918618 - 1920120 | 55105.3 |
| 5-dehydro-2-deoxygluconokinase | HHT355_1702 | Not Available | Negative | 1920213 - 1921229 | 37443.6 |
| hypothetical protein | HHT355_1703 | Not Available | Positive | 1921504 - 1922262 | 27901.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
