Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartyl/glutamyl-trna(asn/gln) amidotransferase subunit b | HHT355_1674 | Not Available | Negative | 1885825 - 1887258 | 54037.6 |
| putative secreted protein | HHT355_1675 | Not Available | Negative | 1887365 - 1887811 | 16453.4 |
| glutamyl-trna(gln) amidotransferase subunit a | HHT355_1676 | Not Available | Negative | 1887887 - 1889350 | 53907.8 |
| hypothetical protein | HHT355_1677 | Not Available | Negative | 1889361 - 1889648 | 10856.0 |
| hypothetical protein | HHT355_1678 | Not Available | Negative | 1889882 - 1892110 | 85286.2 |
| hypothetical protein | HHT355_1679 | Not Available | Negative | 1892119 - 1893147 | 38439.7 |
| diaminopimelate epimerase | HHT355_1680 | Not Available | Negative | 1893266 - 1894102 | 30459.7 |
| hypothetical protein | HHT355_1681 | Not Available | Positive | 1894245 - 1894916 | 25808.6 |
| hypothetical protein | HHT355_1682 | Not Available | Negative | 1894920 - 1896212 | 49225.8 |
| hypothetical protein | HHT355_1683 | Not Available | Negative | 1896209 - 1897108 | 33328.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
