Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HHT355_1664 | Not Available | Negative | 1874068 - 1874499 | 16169.7 |
| cysteine-trna ligase | HHT355_1665 | Not Available | Negative | 1874484 - 1875887 | 53973.4 |
| serine acetyltransferase | HHT355_1666 | Not Available | Negative | 1875936 - 1876628 | 25439.2 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | HHT355_1667 | Not Available | Negative | 1877318 - 1877869 | 19464.7 |
| hypothetical protein | HHT355_1668 | Not Available | Negative | 1877966 - 1879525 | 56216.0 |
| Trna-met | Not Available | Not Available | Positive | 1879807 - 1879880 | Not Available |
| pyruvate formate-lyase 1-activating enzyme | HHT355_1670 | Not Available | Negative | 1880142 - 1880882 | 27996.9 |
| formate acetyltransferase | HHT355_1671 | Not Available | Negative | 1881018 - 1883243 | 84198.6 |
| hypothetical protein | HHT355_1672 | Not Available | Negative | 1883368 - 1883601 | 8910.85 |
| hypothetical protein | HHT355_1673 | Not Available | Positive | 1883790 - 1885700 | 72110.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
