Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| meso-diaminopimelate d-dehydrogenase | HHT355_1634 | Not Available | Negative | 1831194 - 1832183 | 36912.2 |
| phosphoenolpyruvate carboxykinase | HHT355_1635 | Not Available | Negative | 1832498 - 1834309 | 67222.5 |
| ketol-acid reductoisomerase | HHT355_1636 | Not Available | Negative | 1834622 - 1835632 | 36814.6 |
| hypothetical protein | HHT355_1637 | Not Available | Negative | 1835751 - 1836254 | 18577.7 |
| hypothetical protein | HHT355_1638 | Not Available | Negative | 1836482 - 1837411 | 35705.8 |
| hypothetical protein | HHT355_1639 | Not Available | Negative | 1837424 - 1838383 | 37217.1 |
| hypothetical protein | HHT355_1640 | Not Available | Negative | 1838422 - 1840965 | 92646.1 |
| hypothetical protein | HHT355_1641 | Not Available | Positive | 1841171 - 1841404 | 8976.6 |
| hypothetical protein | HHT355_1642 | Not Available | Positive | 1841417 - 1841584 | 6360.48 |
| hypothetical protein | HHT355_1643 | Not Available | Negative | 1841811 - 1843805 | 76944.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
