Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s-ribosylhomocysteine lyase | HHT355_1554 | Not Available | Positive | 1733251 - 1733730 | 18285.0 |
| hypothetical protein | HHT355_1555 | Not Available | Positive | 1733844 - 1734701 | 32573.5 |
| hypothetical protein | HHT355_1556 | Not Available | Positive | 1734706 - 1734975 | 10182.7 |
| putative membrane protein | HHT355_1557 | Not Available | Negative | 1735220 - 1735819 | 22797.1 |
| leucine-trna ligase | HHT355_1558 | Not Available | Negative | 1736112 - 1738520 | 92043.4 |
| hypothetical protein | HHT355_1559 | Not Available | Negative | 1739002 - 1739376 | 14253.4 |
| hypothetical protein | HHT355_1560 | Not Available | Positive | 1739608 - 1740222 | 22801.4 |
| putative membrane protein | HHT355_1561 | Not Available | Negative | 1740269 - 1741621 | 49375.3 |
| hypothetical protein | HHT355_1562 | Not Available | Positive | 1741824 - 1744496 | 97269.7 |
| hypothetical protein | HHT355_1563 | Not Available | Positive | 1744555 - 1744749 | 7634.03 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
