Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative membrane protein | HHT355_1544 | Not Available | Positive | 1718628 - 1720079 | 54548.2 |
| hypothetical protein | HHT355_1545 | Not Available | Positive | 1720203 - 1721180 | 38258.4 |
| tryptophan-trna ligase | HHT355_1546 | Not Available | Negative | 1721274 - 1722278 | 38074.7 |
| hypothetical protein | HHT355_1547 | Not Available | Negative | 1722401 - 1723033 | 23948.7 |
| beta-xylosidase | HHT355_1548 | Not Available | Negative | 1723430 - 1724941 | 58426.5 |
| alpha-n-arabinofuranosidase | HHT355_1549 | Not Available | Negative | 1725079 - 1726578 | 56831.7 |
| hypothetical protein | HHT355_1550 | Not Available | Negative | 1726705 - 1727889 | 44991.6 |
| hypothetical protein | HHT355_1551 | Not Available | Negative | 1728115 - 1730202 | 76061.4 |
| xylosidase/arabinosidase | HHT355_1552 | Not Available | Negative | 1730429 - 1731847 | 52957.9 |
| hypothetical protein | HHT355_1553 | Not Available | Negative | 1731889 - 1732923 | 38958.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
