Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HHT355_1534 | Not Available | Negative | 1709909 - 1710118 | 8490.75 |
| chorismate synthase | HHT355_1535 | Not Available | Positive | 1710373 - 1711485 | 40518.5 |
| putative membrane protein | HHT355_1536 | Not Available | Positive | 1711662 - 1712336 | 26179.7 |
| hypothetical protein | HHT355_1537 | Not Available | Positive | 1712897 - 1713436 | 20129.9 |
| spermidine/putrescine import atp-binding protein pota | HHT355_1538 | Not Available | Positive | 1713459 - 1714535 | 40249.6 |
| putative membrane protein | HHT355_1539 | Not Available | Positive | 1714545 - 1715426 | 32591.5 |
| putative membrane protein | HHT355_1540 | Not Available | Positive | 1715420 - 1716217 | 29742.7 |
| putative secreted protein | HHT355_1541 | Not Available | Positive | 1716306 - 1717352 | 39990.5 |
| putative membrane protein | HHT355_1542 | Not Available | Positive | 1717592 - 1718041 | 16896.7 |
| hypothetical protein | HHT355_1543 | Not Available | Positive | 1718054 - 1718299 | 8900.89 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
