Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HHT355_1524 | Not Available | Negative | 1701632 - 1702201 | 21533.1 |
| putative protein yrvm | HHT355_1525 | Not Available | Negative | 1702287 - 1703051 | 27953.3 |
| hypothetical protein | HHT355_1526 | Not Available | Negative | 1703148 - 1703309 | 5958.84 |
| hypothetical protein | HHT355_1527 | Not Available | Negative | 1703373 - 1703597 | 8569.3 |
| hypothetical protein | HHT355_1528 | Not Available | Positive | 1703760 - 1703948 | 6415.54 |
| xylose isomerase | HHT355_1529 | Not Available | Negative | 1704059 - 1705378 | 49969.7 |
| hypothetical protein | HHT355_1530 | Not Available | Negative | 1705932 - 1706906 | 38535.0 |
| hypothetical protein | HHT355_1531 | Not Available | Negative | 1706906 - 1708042 | 44015.2 |
| hypothetical protein | HHT355_1532 | Not Available | Negative | 1708032 - 1709195 | 42306.1 |
| hypothetical protein | HHT355_1533 | Not Available | Positive | 1709367 - 1709585 | 7732.52 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
