Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HHT355_1514 | Not Available | Negative | 1692816 - 1693181 | 13468.2 |
| hypothetical protein | HHT355_1515 | Not Available | Negative | 1693215 - 1693820 | 24118.4 |
| redox-sensing transcriptional repressor rex | HHT355_1516 | Not Available | Negative | 1693853 - 1694494 | 24025.1 |
| hypothetical protein | HHT355_1517 | Not Available | Negative | 1694457 - 1694588 | 5191.43 |
| hypothetical protein | HHT355_1518 | Not Available | Positive | 1694674 - 1696632 | 74832.5 |
| hypothetical protein | HHT355_1519 | Not Available | Negative | 1696874 - 1697542 | 25297.3 |
| hypothetical protein | HHT355_1520 | Not Available | Negative | 1697598 - 1698764 | 43173.9 |
| hypothetical protein | HHT355_1521 | Not Available | Negative | 1698846 - 1700237 | 53308.7 |
| putative membrane protein | HHT355_1522 | Not Available | Positive | 1700492 - 1700734 | 9291.19 |
| putative membrane protein | HHT355_1523 | Not Available | Negative | 1700859 - 1701590 | 25463.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
