Herbinix hemicellulosilytica

anaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Herbinix

Description

Herbinix hemicellulosilytica is a Gram-positive, anaerobic bacterium. This organism is notable for its ability to thrive in environments lacking oxygen, which suggests it plays a role in anaerobic processes, potentially in the degradation of organic materials. H. hemicellulosilytica possesses a single replicon, indicating a streamlined genomic structure that may be advantageous for its survival in specific ecological niches. The accession number for this bacterium is CVTD000000000.2, which allows for its identification in genomic databases and provides a reference for further research. The anaerobic nature of H. hemicellulosilytica implies it may contribute to various biochemical cycles, particularly in environments rich in plant material, where hemicellulose is a significant component. Its enzymatic capabilities could facilitate the breakdown of hemicellulose, leading to the release of simpler sugars that can be utilized by other microorganisms. This interaction highlights the potential ecological role of H. hemicellulosilytica in nutrient cycling and organic matter decomposition within anaerobic ecosystems. In summary, Herbinix hemicellulosilytica’s Gram-positive, anaerobic characteristics and its unique genomic structure underscore its importance in the degradation of hemicellulose and its potential contributions to ecological processes.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusHerbinix
SpeciesHerbinix hemicellulosilytica
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-positive
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatbiogas reactor; digestive tract; microbial mat
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Herbinix hemicellulosilytica genome assembly TUM3/55, contig

Gene Summary

Adenine Count

961098 bp

Thymine Count

961530 bp

Guanine Count

557161 bp

Cytosine Count

556822 bp

Genome Length

3036611 bp

Protein-coding Genes

2542 genes

Non-Coding Genes

89 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
gtp-dependent nucleic acid-binding protein engdHHT355_1454Not AvailableNegative1619681 - 162077540076.0
hypothetical proteinHHT355_1455Not AvailableNegative1620820 - 162148524628.9
ribulose-phosphate 3-epimeraseHHT355_1456Not AvailableNegative1621466 - 162213724289.4
putative ribosome biogenesis gtpase rsgaHHT355_1457Not AvailableNegative1622265 - 162314633210.2
hypothetical proteinHHT355_1458Not AvailableNegative1623148 - 162527477949.9
hypothetical proteinHHT355_1459Not AvailableNegative1625292 - 162601426755.0
hypothetical proteinHHT355_1460Not AvailableNegative1626299 - 162719836021.5
hypothetical proteinHHT355_1461Not AvailableNegative1627158 - 162745111574.8
putative dual-specificity rna methyltransferase rlmnHHT355_1462Not AvailableNegative1627568 - 162860839415.7
hypothetical proteinHHT355_1463Not AvailableNegative1628618 - 162997951798.9

Displaying genes 1501 – 1510 of 2631 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.