Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylglucosamine 1-carboxyvinyltransferase 2 | HHT355_1444 | Not Available | Negative | 1606626 - 1607906 | 45873.1 |
| putative membrane protein | HHT355_1445 | Not Available | Negative | 1608114 - 1609253 | 41926.0 |
| udp-n-acetylmuramoylalanine-d-glutamate ligase | HHT355_1446 | Not Available | Negative | 1609268 - 1610629 | 50655.1 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | HHT355_1447 | Not Available | Negative | 1610657 - 1611625 | 35310.8 |
| putative membrane protein | HHT355_1448 | Not Available | Negative | 1611816 - 1613765 | 72581.5 |
| hypothetical protein | HHT355_1449 | Not Available | Negative | 1613853 - 1616147 | 84791.7 |
| putative membrane protein | HHT355_1450 | Not Available | Negative | 1616178 - 1616699 | 19934.7 |
| ribosomal rna small subunit methyltransferase h 2 | HHT355_1451 | Not Available | Negative | 1616731 - 1617678 | 35400.7 |
| protein mraz | HHT355_1452 | Not Available | Negative | 1617705 - 1618133 | 16398.7 |
| hypothetical protein | HHT355_1453 | Not Available | Negative | 1618713 - 1619663 | 35780.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
