Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HHT355_1424 | Not Available | Positive | 1582274 - 1582531 | 9616.94 |
| transcriptional repressor nrdr | HHT355_1425 | Not Available | Positive | 1582748 - 1583218 | 18344.0 |
| hypothetical protein | HHT355_1426 | Not Available | Negative | 1583286 - 1583924 | 23942.7 |
| hypothetical protein | HHT355_1427 | Not Available | Negative | 1584440 - 1585621 | 43667.6 |
| aconitate hydratase | HHT355_1428 | Not Available | Negative | 1585722 - 1588514 | 102193.0 |
| galactokinase | HHT355_1429 | Not Available | Negative | 1588838 - 1590025 | 44633.4 |
| rna polymerase sigma-g factor | HHT355_1430 | Not Available | Negative | 1590210 - 1590989 | 29692.0 |
| rna polymerase sigma-35 factor | HHT355_1431 | Not Available | Negative | 1591104 - 1591844 | 28100.3 |
| putative membrane protein | HHT355_1432 | Not Available | Negative | 1591887 - 1592798 | 34460.2 |
| hypothetical protein | HHT355_1433 | Not Available | Negative | 1593199 - 1594275 | 40278.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
