Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HHT355_1367 | Not Available | Negative | 1538148 - 1539743 | 59379.5 |
| hypothetical protein | HHT355_1368 | Not Available | Negative | 1539785 - 1540096 | 11474.5 |
| hypothetical protein | HHT355_1369 | Not Available | Negative | 1540114 - 1540551 | 15958.0 |
| hypothetical protein | HHT355_1370 | Not Available | Negative | 1540573 - 1540965 | 14860.5 |
| gtp-sensing transcriptional pleiotropic repressor cody | HHT355_1371 | Not Available | Negative | 1541324 - 1542094 | 28712.8 |
| dna topoisomerase 1 | HHT355_1372 | Not Available | Negative | 1542313 - 1544394 | 78138.7 |
| hypothetical protein | HHT355_1400 | Not Available | Negative | 1568038 - 1568604 | 22565.6 |
| hypothetical protein | HHT355_1401 | Not Available | Negative | 1568585 - 1568938 | 13645.3 |
| hypothetical protein | HHT355_1402 | Not Available | Negative | 1568952 - 1569863 | 34391.3 |
| hypothetical protein | HHT355_1403 | Not Available | Negative | 1570167 - 1570589 | 16666.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
