Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative chemoreceptor glutamine deamidase ched | HHT355_1337 | Not Available | Negative | 1510422 - 1510907 | 17370.5 |
| hypothetical protein | HHT355_1338 | Not Available | Negative | 1510917 - 1511546 | 22653.6 |
| hypothetical protein | HHT355_1339 | Not Available | Negative | 1511579 - 1512007 | 15872.3 |
| chemotaxis protein chea | HHT355_1340 | Not Available | Negative | 1512040 - 1514115 | 76859.7 |
| hypothetical protein | HHT355_1341 | Not Available | Negative | 1514106 - 1515194 | 39470.2 |
| hypothetical protein | HHT355_1342 | Not Available | Negative | 1515230 - 1515991 | 29721.3 |
| hypothetical protein | HHT355_1343 | Not Available | Negative | 1515996 - 1516889 | 32478.6 |
| hypothetical protein | HHT355_1344 | Not Available | Negative | 1516891 - 1518069 | 44871.1 |
| flagellar biosynthesis protein flha | HHT355_1345 | Not Available | Negative | 1518069 - 1520102 | 75014.0 |
| putative membrane protein | HHT355_1346 | Not Available | Negative | 1520502 - 1521632 | 42808.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
