Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HHT355_1317 | Not Available | Negative | 1488281 - 1492984 | 177218.0 |
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | HHT355_1318 | Not Available | Negative | 1493079 - 1494137 | 37870.2 |
| hypothetical protein | HHT355_1319 | Not Available | Negative | 1494180 - 1495475 | 47892.7 |
| 1-deoxy-d-xylulose 5-phosphate reductoisomerase | HHT355_1320 | Not Available | Negative | 1495505 - 1496671 | 43048.8 |
| putative membrane protein | HHT355_1321 | Not Available | Negative | 1496747 - 1497559 | 29854.8 |
| isoprenyl transferase | HHT355_1322 | Not Available | Negative | 1497574 - 1498293 | 27748.3 |
| ribosome-recycling factor | HHT355_1323 | Not Available | Negative | 1498648 - 1499202 | 21354.6 |
| uridylate kinase | HHT355_1324 | Not Available | Negative | 1499257 - 1499961 | 25497.9 |
| hypothetical protein | HHT355_1325 | Not Available | Negative | 1500054 - 1500926 | 30890.3 |
| hypothetical protein | HHT355_1326 | Not Available | Negative | 1500949 - 1502349 | 52013.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
