Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative membrane protein | HHT355_1297 | Not Available | Negative | 1470820 - 1471119 | 11963.9 |
| hypothetical protein | HHT355_1298 | Not Available | Negative | 1471372 - 1472271 | 36021.5 |
| hypothetical protein | HHT355_1299 | Not Available | Negative | 1472231 - 1472524 | 11574.8 |
| hypothetical protein | HHT355_1300 | Not Available | Negative | 1472534 - 1473103 | 21967.9 |
| hypothetical protein | HHT355_1301 | Not Available | Negative | 1473079 - 1473966 | 34006.1 |
| putative membrane protein | HHT355_1302 | Not Available | Negative | 1473963 - 1474601 | 24262.0 |
| capsular polysaccharide biosynthesis protein capd | HHT355_1303 | Not Available | Negative | 1474655 - 1476514 | 69730.9 |
| hypothetical protein | HHT355_1304 | Not Available | Negative | 1476524 - 1476760 | 9611.84 |
| hypothetical protein | HHT355_1305 | Not Available | Negative | 1476999 - 1477748 | 28435.3 |
| dtdp-glucose 4,6-dehydratase 2 | HHT355_1306 | Not Available | Negative | 1477905 - 1478933 | 39188.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
