Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-glucose 6-dehydrogenase | HHT355_1277 | Not Available | Negative | 1452156 - 1453322 | 43885.5 |
| protein capi | HHT355_1278 | Not Available | Negative | 1453411 - 1454430 | 38921.4 |
| putative membrane protein | HHT355_1279 | Not Available | Negative | 1454504 - 1455499 | 39844.5 |
| hypothetical protein | HHT355_1280 | Not Available | Negative | 1455531 - 1456298 | 30162.9 |
| hypothetical protein | HHT355_1281 | Not Available | Negative | 1456317 - 1456961 | 25973.5 |
| hypothetical protein | HHT355_1282 | Not Available | Negative | 1456967 - 1457185 | 8460.35 |
| hypothetical protein | HHT355_1283 | Not Available | Negative | 1457799 - 1458698 | 36021.5 |
| hypothetical protein | HHT355_1284 | Not Available | Negative | 1458658 - 1458951 | 11574.8 |
| putative membrane protein | HHT355_1285 | Not Available | Negative | 1458989 - 1460011 | 38605.3 |
| hypothetical protein | HHT355_1286 | Not Available | Negative | 1460030 - 1461241 | 46638.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
