Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HHT355_1247 | Not Available | Negative | 1419491 - 1420408 | 34744.5 |
| trna pseudouridine synthase b | HHT355_1248 | Not Available | Negative | 1420427 - 1421338 | 33871.2 |
| hypothetical protein | HHT355_1249 | Not Available | Negative | 1421353 - 1422342 | 36571.8 |
| hypothetical protein | HHT355_1250 | Not Available | Negative | 1422430 - 1422861 | 16038.9 |
| translation initiation factor if-2 | HHT355_1251 | Not Available | Negative | 1422910 - 1426074 | 113697.0 |
| hypothetical protein | HHT355_1252 | Not Available | Negative | 1426098 - 1426412 | 11608.2 |
| hypothetical protein | HHT355_1253 | Not Available | Negative | 1426384 - 1426671 | 10519.2 |
| transcription elongation protein nusa | HHT355_1254 | Not Available | Negative | 1426686 - 1427732 | 38703.5 |
| ribosome maturation factor rimp | HHT355_1255 | Not Available | Negative | 1427773 - 1428240 | 18048.6 |
| putative amino-acid abc transporter atp-binding protein yecc | HHT355_1256 | Not Available | Negative | 1428459 - 1429229 | 28825.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
