Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative membrane protein | HHT355_0049 | Not Available | Positive | 46246 - 47064 | 30919.1 |
| putative membrane protein | HHT355_0050 | Not Available | Positive | 47276 - 47884 | 21455.6 |
| hypothetical protein | HHT355_0051 | Not Available | Positive | 48315 - 48809 | 18765.1 |
| hypothetical protein | HHT355_0052 | Not Available | Positive | 48981 - 49178 | 7473.59 |
| hypothetical protein | HHT355_0053 | Not Available | Positive | 49204 - 49560 | 13336.7 |
| putative membrane protein | HHT355_0054 | Not Available | Positive | 49898 - 50593 | 25187.9 |
| putative membrane protein | HHT355_0055 | Not Available | Positive | 50590 - 51453 | 31295.1 |
| hypothetical protein | HHT355_0056 | Not Available | Positive | 51643 - 53022 | 50174.9 |
| putative membrane protein | HHT355_0057 | Not Available | Positive | 53034 - 53999 | 36258.7 |
| hypothetical protein | HHT355_0058 | Not Available | Negative | 54052 - 54372 | 11214.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
