Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HHT355_1207 | Not Available | Negative | 1367796 - 1368911 | 42013.3 |
| putative membrane protein | HHT355_1208 | Not Available | Negative | 1368919 - 1370064 | 43276.3 |
| hypothetical protein | HHT355_1209 | Not Available | Negative | 1370061 - 1371164 | 41968.4 |
| putative abc transporter atp-binding protein yfil | HHT355_1210 | Not Available | Negative | 1371227 - 1372171 | 34839.6 |
| tyrosine-trna ligase | HHT355_1211 | Not Available | Positive | 1372583 - 1373812 | 46517.0 |
| putative membrane protein | HHT355_1212 | Not Available | Positive | 1373900 - 1374985 | 41544.7 |
| hypothetical protein | HHT355_1213 | Not Available | Positive | 1375729 - 1376721 | 36485.1 |
| putative membrane protein | HHT355_1214 | Not Available | Positive | 1376855 - 1377415 | 20094.9 |
| hypothetical protein | HHT355_1215 | Not Available | Negative | 1377634 - 1380858 | 124092.0 |
| aspartate carbamoyltransferase | HHT355_1216 | Not Available | Positive | 1381184 - 1382095 | 34254.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
