Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HHT355_1167 | Not Available | Positive | 1323466 - 1324431 | 35855.7 |
| hypothetical protein | HHT355_1168 | Not Available | Positive | 1324653 - 1325072 | 16051.5 |
| putative membrane protein | HHT355_1169 | Not Available | Negative | 1325444 - 1325644 | 7462.28 |
| hypothetical protein | HHT355_1170 | Not Available | Positive | 1325822 - 1327213 | 53554.5 |
| hypothetical protein | HHT355_1171 | Not Available | Positive | 1327389 - 1328141 | 28829.8 |
| hypothetical protein | HHT355_1172 | Not Available | Positive | 1328180 - 1328737 | 21050.8 |
| hypothetical protein | HHT355_1173 | Not Available | Positive | 1328757 - 1329521 | 29153.1 |
| hypothetical protein | HHT355_1174 | Not Available | Positive | 1329704 - 1330795 | 40677.6 |
| hypothetical protein | HHT355_1175 | Not Available | Positive | 1330845 - 1331405 | 21600.0 |
| putative rna pseudouridine synthase ylyb | HHT355_1176 | Not Available | Positive | 1331383 - 1332357 | 36722.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
