Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| upf0758 protein | HHT355_1157 | Not Available | Positive | 1313757 - 1314455 | 26196.5 |
| hypothetical protein | HHT355_1158 | Not Available | Positive | 1314497 - 1315519 | 36793.9 |
| putative membrane protein | HHT355_1159 | Not Available | Positive | 1315666 - 1316544 | 33224.5 |
| putative membrane protein | HHT355_1160 | Not Available | Positive | 1316561 - 1317067 | 19520.6 |
| hypothetical protein | HHT355_1161 | Not Available | Positive | 1317070 - 1319919 | 107009.0 |
| putative septum site-determining protein minc | HHT355_1162 | Not Available | Positive | 1319948 - 1320622 | 24898.1 |
| septum site-determining protein mind | HHT355_1163 | Not Available | Positive | 1320810 - 1321598 | 28947.3 |
| hypothetical protein | HHT355_1164 | Not Available | Positive | 1321614 - 1321889 | 10008.2 |
| putative membrane protein | HHT355_1165 | Not Available | Positive | 1321901 - 1323013 | 41566.6 |
| hypothetical protein | HHT355_1166 | Not Available | Positive | 1323026 - 1323424 | 14857.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
