Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutaconyl-coa decarboxylase subunit beta | HHT355_1127 | Not Available | Positive | 1281108 - 1282259 | 40598.2 |
| pyruvate carboxylase subunit b | HHT355_1128 | Not Available | Positive | 1282309 - 1283721 | 52707.8 |
| hypothetical protein | HHT355_1129 | Not Available | Positive | 1284127 - 1284501 | 14370.2 |
| signal recognition particle protein | HHT355_1130 | Not Available | Positive | 1284503 - 1285846 | 48859.3 |
| hypothetical protein | HHT355_1131 | Not Available | Positive | 1285952 - 1286194 | 8960.9 |
| hypothetical protein | HHT355_1132 | Not Available | Positive | 1286379 - 1286609 | 8283.34 |
| ribosome maturation factor rimm | HHT355_1133 | Not Available | Positive | 1286993 - 1287499 | 19272.3 |
| trna (guanine-n(1)-)-methyltransferase | HHT355_1134 | Not Available | Positive | 1287541 - 1288320 | 29939.8 |
| hypothetical protein | HHT355_1135 | Not Available | Positive | 1288431 - 1288778 | 13203.1 |
| hypothetical protein | HHT355_1136 | Not Available | Positive | 1289200 - 1289784 | 22272.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
