Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative protein mth_692 | HHT355_0039 | Not Available | Positive | 33069 - 33995 | 33944.7 |
| hypothetical protein | HHT355_0040 | Not Available | Positive | 34406 - 36295 | 72840.5 |
| ornithine carbamoyltransferase | HHT355_0041 | Not Available | Positive | 36454 - 37398 | 34866.2 |
| hypothetical protein | HHT355_0042 | Not Available | Positive | 37568 - 37930 | 14136.0 |
| type iii pantothenate kinase | HHT355_0043 | Not Available | Positive | 37930 - 38706 | 27675.2 |
| putative trna-dihydrouridine synthase 1 | HHT355_0044 | Not Available | Positive | 38722 - 39693 | 36021.0 |
| hypothetical protein | HHT355_0045 | Not Available | Positive | 39847 - 40929 | 40451.6 |
| hypothetical protein | HHT355_0046 | Not Available | Positive | 41295 - 42470 | 47098.3 |
| putative membrane protein | HHT355_0047 | Not Available | Negative | 42663 - 43373 | 27807.2 |
| hypothetical protein | HHT355_0048 | Not Available | Positive | 43700 - 46138 | 92695.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
