Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional protein fold | HHT355_1107 | Not Available | Positive | 1258070 - 1258909 | 30439.4 |
| ribosomal protein s12 methylthiotransferase rimo | HHT355_1108 | Not Available | Positive | 1259005 - 1260360 | 51150.1 |
| putative membrane protein | HHT355_1109 | Not Available | Positive | 1260344 - 1260889 | 20294.0 |
| putative competence-damage inducible protein | HHT355_1110 | Not Available | Positive | 1260910 - 1262193 | 46785.7 |
| putative secreted protein | HHT355_1111 | Not Available | Positive | 1262285 - 1262959 | 24483.4 |
| hypothetical protein | HHT355_1112 | Not Available | Positive | 1263058 - 1264290 | 45488.4 |
| cytidylate kinase | HHT355_1113 | Not Available | Positive | 1264400 - 1265074 | 25392.6 |
| hypothetical protein | HHT355_1114 | Not Available | Positive | 1265088 - 1267055 | 73404.4 |
| chemotaxis protein methyltransferase | HHT355_1115 | Not Available | Positive | 1267119 - 1267898 | 30690.1 |
| phosphate acyltransferase | HHT355_1116 | Not Available | Positive | 1268318 - 1269328 | 36145.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
