Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HHT355_1087 | Not Available | Positive | 1234702 - 1235505 | 28729.9 |
| hypothetical protein | HHT355_1088 | Not Available | Positive | 1235533 - 1236069 | 20447.5 |
| hypothetical protein | HHT355_1089 | Not Available | Positive | 1236166 - 1236789 | 24034.7 |
| tyrosine recombinase xerd | HHT355_1090 | Not Available | Positive | 1236822 - 1237682 | 32936.1 |
| hypothetical protein | HHT355_1091 | Not Available | Negative | 1237840 - 1238868 | 38753.7 |
| pyrimidine-nucleoside phosphorylase | HHT355_1092 | Not Available | Positive | 1239046 - 1240374 | 47671.8 |
| hypothetical protein | HHT355_1093 | Not Available | Positive | 1240799 - 1241197 | 14734.6 |
| d-alanyl-d-alanine carboxypeptidase dacf | HHT355_1094 | Not Available | Positive | 1241291 - 1242517 | 44986.5 |
| hypothetical protein | HHT355_1095 | Not Available | Positive | 1242666 - 1243556 | 33778.0 |
| hypothetical protein | HHT355_1096 | Not Available | Positive | 1243593 - 1244369 | 30560.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
