Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HHT355_1067 | Not Available | Positive | 1211517 - 1212104 | 22801.5 |
| hypothetical protein | HHT355_1068 | Not Available | Positive | 1212287 - 1212463 | 6891.42 |
| hypothetical protein | HHT355_1069 | Not Available | Positive | 1213038 - 1213400 | 13817.8 |
| hypothetical protein | HHT355_1070 | Not Available | Positive | 1213526 - 1214767 | 48020.6 |
| phoh-like protein | HHT355_1071 | Not Available | Positive | 1214742 - 1215752 | 37560.0 |
| hypothetical protein | HHT355_1072 | Not Available | Positive | 1215777 - 1217312 | 58248.2 |
| hypothetical protein | HHT355_1073 | Not Available | Positive | 1217313 - 1217810 | 19096.3 |
| putative secreted protein | HHT355_1074 | Not Available | Positive | 1217828 - 1218922 | 41947.5 |
| hypothetical protein | HHT355_1075 | Not Available | Positive | 1218933 - 1220615 | 61510.6 |
| putative secreted protein | HHT355_1076 | Not Available | Positive | 1220748 - 1221452 | 26986.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
