Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HHT355_1057 | Not Available | Positive | 1197848 - 1198405 | 21776.4 |
| hypothetical protein | HHT355_1058 | Not Available | Positive | 1198518 - 1199783 | 47956.0 |
| atp phosphoribosyltransferase | HHT355_1059 | Not Available | Positive | 1199832 - 1200488 | 24399.9 |
| histidinol dehydrogenase | HHT355_1060 | Not Available | Positive | 1200501 - 1201793 | 47259.6 |
| imidazoleglycerol-phosphate dehydratase | HHT355_1061 | Not Available | Positive | 1201921 - 1202511 | 21889.3 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase | HHT355_1062 | Not Available | Positive | 1202551 - 1203267 | 25870.8 |
| hypothetical protein | HHT355_1063 | Not Available | Positive | 1203289 - 1204551 | 47897.5 |
| alanine-trna ligase 1 | HHT355_1064 | Not Available | Positive | 1204766 - 1207408 | 97324.5 |
| hypothetical protein | HHT355_1065 | Not Available | Negative | 1207582 - 1209120 | 55960.8 |
| hypothetical protein | HHT355_1066 | Not Available | Negative | 1209290 - 1211341 | 75928.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
