Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chaperone protein dnak | HHT355_1047 | Not Available | Positive | 1186769 - 1188619 | 66555.7 |
| chaperone protein dnaj | HHT355_1048 | Not Available | Positive | 1188722 - 1189858 | 41714.3 |
| ribosomal protein l11 methyltransferase | HHT355_1049 | Not Available | Positive | 1189877 - 1190872 | 36474.6 |
| hypothetical protein | HHT355_1050 | Not Available | Negative | 1190898 - 1191704 | 29856.4 |
| hypothetical protein | HHT355_1051 | Not Available | Positive | 1191895 - 1192635 | 27541.9 |
| gtp pyrophosphokinase yjbm | HHT355_1052 | Not Available | Positive | 1192702 - 1193505 | 31679.4 |
| hypothetical protein | HHT355_1053 | Not Available | Positive | 1193550 - 1194953 | 53422.2 |
| putative rna pseudouridine synthase ytzg | HHT355_1054 | Not Available | Positive | 1195110 - 1195838 | 27079.0 |
| hypothetical protein | HHT355_1055 | Not Available | Positive | 1196111 - 1196758 | 24917.0 |
| hypothetical protein | HHT355_1056 | Not Available | Positive | 1196840 - 1197808 | 36731.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
