Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-ser | Not Available | Not Available | Positive | 1172864 - 1172952 | Not Available |
| glutamate 2,3-aminomutase | HHT355_1038 | Not Available | Positive | 1174037 - 1175275 | 47849.1 |
| hypothetical protein | HHT355_1039 | Not Available | Positive | 1175527 - 1177827 | 88682.1 |
| hypothetical protein | HHT355_1040 | Not Available | Negative | 1178076 - 1178339 | 9412.92 |
| germination protease | HHT355_1041 | Not Available | Positive | 1178593 - 1179510 | 33382.2 |
| putative membrane protein | HHT355_1042 | Not Available | Positive | 1179592 - 1180953 | 51803.4 |
| elongation factor 4 | HHT355_1043 | Not Available | Positive | 1181356 - 1183167 | 67717.1 |
| hypothetical protein | HHT355_1044 | Not Available | Positive | 1183193 - 1184506 | 50416.6 |
| heat-inducible transcription repressor hrca | HHT355_1045 | Not Available | Positive | 1184832 - 1185863 | 38985.3 |
| hypothetical protein | HHT355_1046 | Not Available | Positive | 1185896 - 1186717 | 31043.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
