Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HHT355_1017 | Not Available | Positive | 1153670 - 1155022 | 48873.3 |
| putative membrane protein | HHT355_1018 | Not Available | Positive | 1155024 - 1155989 | 34530.2 |
| hypothetical protein | HHT355_1019 | Not Available | Positive | 1156044 - 1157036 | 35196.9 |
| hypothetical protein | HHT355_1020 | Not Available | Positive | 1157120 - 1157890 | 28274.8 |
| hypothetical protein | HHT355_1021 | Not Available | Positive | 1157986 - 1158351 | 13917.0 |
| putative membrane protein | HHT355_1022 | Not Available | Positive | 1158380 - 1158871 | 17685.1 |
| hypothetical protein | HHT355_1023 | Not Available | Positive | 1158947 - 1159528 | 21951.8 |
| putative secreted protein | HHT355_1024 | Not Available | Positive | 1159633 - 1160814 | 41987.3 |
| putative abc transporter atp-binding protein yufo | HHT355_1025 | Not Available | Positive | 1161043 - 1162590 | 57931.0 |
| putative secreted protein | HHT355_1026 | Not Available | Positive | 1162583 - 1163884 | 46766.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
