Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HHT355_0997 | Not Available | Positive | 1130713 - 1131426 | 26689.1 |
| hypothetical protein | HHT355_0998 | Not Available | Positive | 1131707 - 1132753 | 38162.8 |
| hypothetical protein | HHT355_0999 | Not Available | Positive | 1132909 - 1133139 | 8656.8 |
| 6-phosphogluconate dehydrogenase, decarboxylating 2 | HHT355_1000 | Not Available | Positive | 1133226 - 1134656 | 52949.9 |
| glucose-6-phosphate 1-dehydrogenase | HHT355_1001 | Not Available | Positive | 1134804 - 1136309 | 57780.4 |
| hypothetical protein | HHT355_1002 | Not Available | Positive | 1136322 - 1136963 | 23893.9 |
| hypothetical protein | HHT355_1003 | Not Available | Positive | 1137341 - 1138570 | 47346.2 |
| hypothetical protein | HHT355_1004 | Not Available | Positive | 1138705 - 1139556 | 31158.8 |
| hypothetical protein | HHT355_1005 | Not Available | Positive | 1139973 - 1140167 | 7386.51 |
| pyruvate-flavodoxin oxidoreductase | HHT355_1006 | Not Available | Positive | 1140182 - 1143730 | 131382.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
