Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HHT355_0957 | Not Available | Positive | 1085637 - 1086038 | 16180.2 |
| hypothetical protein | HHT355_0958 | Not Available | Positive | 1086201 - 1086599 | 16135.1 |
| hypothetical protein | HHT355_0959 | Not Available | Positive | 1086994 - 1087467 | 18500.3 |
| hypothetical protein | HHT355_0960 | Not Available | Negative | 1087637 - 1088698 | 39252.1 |
| undecaprenyl-diphosphatase | HHT355_0961 | Not Available | Positive | 1088953 - 1089777 | 30793.8 |
| hypothetical protein | HHT355_0962 | Not Available | Positive | 1089909 - 1091621 | 64925.9 |
| dihydroxy-acid dehydratase | HHT355_0963 | Not Available | Positive | 1091706 - 1093427 | 62552.4 |
| hypothetical protein | HHT355_0964 | Not Available | Positive | 1093533 - 1094426 | 33498.6 |
| hypothetical protein | HHT355_0965 | Not Available | Negative | 1094556 - 1095746 | 44018.8 |
| xylosidase/arabinosidase | HHT355_0966 | Not Available | Negative | 1096132 - 1097115 | 37260.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
