Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative membrane protein | HHT355_0937 | Not Available | Positive | 1063610 - 1064134 | 19439.5 |
| hypothetical protein | HHT355_0938 | Not Available | Negative | 1064289 - 1065479 | 46717.5 |
| putative membrane protein | HHT355_0939 | Not Available | Positive | 1065811 - 1066995 | 42683.1 |
| zinc transporter zupt | HHT355_0940 | Not Available | Positive | 1067022 - 1067828 | 28759.7 |
| hypothetical protein | HHT355_0941 | Not Available | Positive | 1068492 - 1070294 | 68708.4 |
| putative secreted protein | HHT355_0942 | Not Available | Positive | 1070439 - 1071731 | 49216.4 |
| putative membrane protein | HHT355_0943 | Not Available | Positive | 1072013 - 1072741 | 27382.8 |
| hypothetical protein | HHT355_0944 | Not Available | Positive | 1072752 - 1073117 | 13971.0 |
| hypothetical protein | HHT355_0945 | Not Available | Positive | 1073271 - 1076009 | 103783.0 |
| hypothetical protein | HHT355_0946 | Not Available | Positive | 1076250 - 1078541 | 87384.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
