Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Herbinix
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Herbinix |
| Species | Herbinix hemicellulosilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | biogas reactor; digestive tract; microbial mat |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
961098 bp
Thymine Count
961530 bp
Guanine Count
557161 bp
Cytosine Count
556822 bp
Genome Length
3036611 bp
Protein-coding Genes
2542 genes
Non-Coding Genes
89 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HHT355_0019 | Not Available | Positive | 12044 - 13381 | 50283.9 |
| hypothetical protein | HHT355_0020 | Not Available | Positive | 13614 - 15323 | 62937.0 |
| hypothetical protein | HHT355_0021 | Not Available | Positive | 15453 - 16010 | 20101.2 |
| putative membrane protein | HHT355_0022 | Not Available | Negative | 16087 - 17412 | 47250.9 |
| hypothetical protein | HHT355_0023 | Not Available | Positive | 17903 - 18238 | 12409.2 |
| hypothetical protein | HHT355_0024 | Not Available | Positive | 18798 - 19028 | 8406.91 |
| phosphoglucosamine mutase | HHT355_0025 | Not Available | Positive | 19231 - 20574 | 49218.9 |
| trigger factor | HHT355_0026 | Not Available | Positive | 20757 - 22043 | 48700.1 |
| atp-dependent clp protease proteolytic subunit | HHT355_0027 | Not Available | Positive | 22107 - 22688 | 21250.7 |
| atp-dependent clp protease atp-binding subunit clpx | HHT355_0028 | Not Available | Positive | 22734 - 24029 | 47907.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
