Halodesulfovibrio spirochaetisodalis str. JC271

curved/spiralanaerobic

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Desulfovibrionia

Order

Desulfovibrionales

Family

Desulfovibrionaceae

Genus

Halodesulfovibrio

Description

Halodesulfovibrio spirochaetisodalis str. JC271 is a Gram-negative, anaerobic bacterium characterized by its curved or spiral shape. This species possesses true flagella, which contribute to its motility in anaerobic environments. The optimal growth temperature for Halodesulfovibrio spirochaetisodalis is 32°C, placing it within the mesophilic temperature range. The organism has a single replicon, indicating a streamlined genomic architecture. The accession number for this strain is JXMS00000000.1, which is relevant for researchers seeking to access its genomic data. In terms of ecological significance, Halodesulfovibrio spirochaetisodalis str. JC271 may play a role in anaerobic biogeochemical cycles, particularly in environments where sulfate reduction occurs. Its ability to thrive in anaerobic conditions suggests that it could be involved in the degradation of organic matter, contributing to nutrient cycling in its habitat. This capability highlights the importance of such microorganisms in maintaining ecosystem balance and facilitating energy flow within anaerobic niches.

Taxonomy

KingdomPseudomonadati
PhylumThermodesulfobacteriota
ClassDesulfovibrionia
OrderDesulfovibrionales
FamilyDesulfovibrionaceae
GenusHalodesulfovibrio
SpeciesHalodesulfovibrio spirochaetisodalis
StrainJC271

Profile

Physiology
Gram staining propertiesGram-negative
Shapecurved/spiral
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperature32
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halodesulfovibrio spirochaetisodalis strain JC271 contig59, whole

Gene Summary

Adenine Count

973910 bp

Thymine Count

971051 bp

Guanine Count

835595 bp

Cytosine Count

833914 bp

Genome Length

3614588 bp

Protein-coding Genes

2797 genes

Non-Coding Genes

147 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
mandelate racemaseSP90_12800P51981Positive2841533 - 284251935512.7
d-amino acid aminotransferaseSP90_12805P63511Positive2842552 - 284339731061.4
hypothetical proteinSP90_12810Not AvailablePositive2843742 - 284464134258.9
hypothetical proteinSP90_12815Not AvailablePositive2844735 - 284503411269.2
hypothetical proteinSP90_12820Not AvailablePositive2845334 - 28456009855.85
hypothetical proteinSP90_12825Not AvailablePositive2845578 - 28457908269.48
hypothetical proteinSP90_12840Not AvailableNegative2847707 - 284878339973.6
hypothetical proteinSP90_12845Not AvailableNegative2848780 - 284917514740.1
hypothetical proteinSP90_12850Not AvailablePositive2850132 - 285045212578.0
hypothetical proteinSP90_12855Not AvailablePositive2850588 - 285135826112.7

Displaying genes 2291 – 2300 of 2944 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

164 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000232(4S)-perillyl alcoholC10H16OChemical structure of (4S)-perillyl alcoholNot available
Average152.237Da
Monoisotopic152.1201151Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000542HgHgChemical structure of HgNot available
Average200.59Da
Monoisotopic201.9706256Da
BASm0000642S-adenosyl-4-methylsulfanyl-2-oxobutanoateC15H19N5O6SChemical structure of S-adenosyl-4-methylsulfanyl-2-oxobutanoateNot available
Average397.406Da
Monoisotopic397.105604055Da
BASm00006473-hydroxypropanoateC3H5O3Chemical structure of 3-hydroxypropanoateNot available
Average89.071Da
Monoisotopic89.0244176Da

Displaying 1–10 of 164 metabolites

Health Effects

No health effects information available for this bacterium.