Halodesulfovibrio spirochaetisodalis str. JC271

curved/spiralanaerobic

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Desulfovibrionia

Order

Desulfovibrionales

Family

Desulfovibrionaceae

Genus

Halodesulfovibrio

Description

Halodesulfovibrio spirochaetisodalis str. JC271 is a Gram-negative, anaerobic bacterium characterized by its curved or spiral shape. This species possesses true flagella, which contribute to its motility in anaerobic environments. The optimal growth temperature for Halodesulfovibrio spirochaetisodalis is 32°C, placing it within the mesophilic temperature range. The organism has a single replicon, indicating a streamlined genomic architecture. The accession number for this strain is JXMS00000000.1, which is relevant for researchers seeking to access its genomic data. In terms of ecological significance, Halodesulfovibrio spirochaetisodalis str. JC271 may play a role in anaerobic biogeochemical cycles, particularly in environments where sulfate reduction occurs. Its ability to thrive in anaerobic conditions suggests that it could be involved in the degradation of organic matter, contributing to nutrient cycling in its habitat. This capability highlights the importance of such microorganisms in maintaining ecosystem balance and facilitating energy flow within anaerobic niches.

Taxonomy

KingdomPseudomonadati
PhylumThermodesulfobacteriota
ClassDesulfovibrionia
OrderDesulfovibrionales
FamilyDesulfovibrionaceae
GenusHalodesulfovibrio
SpeciesHalodesulfovibrio spirochaetisodalis
StrainJC271

Profile

Physiology
Gram staining propertiesGram-negative
Shapecurved/spiral
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperature32
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halodesulfovibrio spirochaetisodalis strain JC271 contig59, whole

Gene Summary

Adenine Count

973910 bp

Thymine Count

971051 bp

Guanine Count

835595 bp

Cytosine Count

833914 bp

Genome Length

3614588 bp

Protein-coding Genes

2797 genes

Non-Coding Genes

147 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinSP90_00845Not AvailablePositive169598 - 17098051176.2
membrane proteinSP90_00850Not AvailableNegative170986 - 17215841851.0
alkaline phosphataseSP90_00855O60109Negative172244 - 17372853531.6
abc transporter atp-binding proteinSP90_00860Not AvailableNegative174119 - 17489229236.4
amino acid abc transporter permeaseSP90_00865P45768Negative174911 - 17599340302.3
amino acid abc transporter substrate-binding proteinSP90_00875Q52812Negative177536 - 17853736862.1
hypothetical proteinSP90_00880Not AvailableNegative178944 - 17985234110.0
hypothetical proteinSP90_00885P05149Negative180342 - 18142739433.3
alcohol dehydrogenaseSP90_00890P37686Positive181835 - 18301642106.9
hypothetical proteinSP90_00895Not AvailablePositive183219 - 1834046522.97

Displaying genes 181 – 190 of 2944 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

164 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000232(4S)-perillyl alcoholC10H16OChemical structure of (4S)-perillyl alcoholNot available
Average152.237Da
Monoisotopic152.1201151Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000542HgHgChemical structure of HgNot available
Average200.59Da
Monoisotopic201.9706256Da
BASm0000642S-adenosyl-4-methylsulfanyl-2-oxobutanoateC15H19N5O6SChemical structure of S-adenosyl-4-methylsulfanyl-2-oxobutanoateNot available
Average397.406Da
Monoisotopic397.105604055Da
BASm00006473-hydroxypropanoateC3H5O3Chemical structure of 3-hydroxypropanoateNot available
Average89.071Da
Monoisotopic89.0244176Da

Displaying 1–10 of 164 metabolites

Health Effects

No health effects information available for this bacterium.