Silvibacterium dinghuense str. DHOF10

Kingdom

Pseudomonadati

Phylum

Acidobacteriota

Class

Terriglobia

Order

Terriglobales

Family

Acidobacteriaceae

Genus

Silvibacterium

Description

Silvibacterium dinghuense str. DHOF10 is a bacterial strain characterized by its single replicon structure, which is indicative of its genomic organization. The strain is cataloged under the accession number SDMK00000000.1, which allows for its identification and retrieval in genomic databases. As a member of the genus Silvibacterium, this strain is likely adapted to specific ecological niches, potentially exhibiting traits that enable survival in particular environmental conditions. However, specific ecological roles or physiological traits of Silvibacterium dinghuense str. DHOF10 are not detailed in the provided data. The single replicon suggests a streamlined genetic architecture that may contribute to efficient replication and stability within its ecological context. While the precise ecological interactions or functionalities of this strain remain unspecified, the presence of a single replicon can often be associated with certain adaptive advantages, such as reduced metabolic burden and increased adaptability to environmental changes. In summary, Silvibacterium dinghuense str. DHOF10, with its singular replicon and designated genomic accession, exemplifies a bacterial organization that may allow for specialized ecological roles, although further research would be necessary to elucidate its specific biological functions and environmental interactions.

Taxonomy

KingdomPseudomonadati
PhylumAcidobacteriota
ClassTerriglobia
OrderTerriglobales
FamilyAcidobacteriaceae
GenusSilvibacterium
SpeciesSilvibacterium dinghuense
StrainDHOF10

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Silvibacterium dinghuense str. DHOF10
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Silvibacterium dinghuense strain DHOF10 scaffold9, whole genome

Gene Summary

Adenine Count

1032725 bp

Thymine Count

988123 bp

Guanine Count

1495713 bp

Cytosine Count

1599704 bp

Genome Length

5116883 bp

Protein-coding Genes

3911 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
padr family transcriptional regulatorESZ00_06125Not AvailableNegative1552818 - 155315912665.1
lysm peptidoglycan-binding domain-containing proteinESZ00_06140Not AvailableNegative1554294 - 155591358644.8
elongation factor 4ESZ00_06145Not AvailablePositive1556408 - 155821966808.0
omph family outer membrane proteinESZ00_06150Not AvailableNegative1558589 - 155924222910.9
outer membrane protein assembly factor bamaESZ00_06155Not AvailableNegative1559496 - 1562477111167.0
cpxcg motif-containing cysteine-rich proteinESZ00_06160Not AvailableNegative1562511 - 15626936641.72
sgcj/ecac family oxidoreductaseESZ00_06165Not AvailablePositive1562859 - 156337719074.6
duf4965 domain-containing proteinESZ00_06170Not AvailablePositive1563510 - 156560978150.8
tlpa family protein disulfide reductaseESZ00_06175Not AvailablePositive1565776 - 156803784495.1
fatty acid hydroxylase family proteinESZ00_06180Not AvailablePositive1568364 - 156932936337.1

Displaying genes 1221 – 1230 of 3964 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.