Kingdom
Bacillati
Phylum
Bacillota
Class
Limnochordia
Order
Limnochordales
Family
Limnochordaceae
Genus
Limnochorda
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Limnochordia |
| Order | Limnochordales |
| Family | Limnochordaceae |
| Genus | Limnochorda |
| Species | Limnochorda pilosa |
| Strain | HC45 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
578475 bp
Thymine Count
576902 bp
Guanine Count
1319982 bp
Cytosine Count
1341677 bp
Genome Length
3817036 bp
Protein-coding Genes
3545 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| voc family protein | LIP_RS04510 | Not Available | Negative | 1022492 - 1022887 | 14707.4 |
| sigma-70 family rna polymerase sigma factor | LIP_RS04515 | P9WGH2 | Positive | 1022967 - 1023842 | 31990.3 |
| hypothetical protein | LIP_RS04520 | Not Available | Negative | 1024163 - 1024444 | 10374.4 |
| nad(+)--rifampin adp-ribosyltransferase | LIP_RS20395 | Not Available | Negative | 1024514 - 1024846 | 12236.3 |
| atp-binding protein | LIP_RS04525 | Not Available | Negative | 1024940 - 1025617 | 24955.0 |
| transposase | LIP_RS20400 | Not Available | Positive | 1026050 - 1026610 | 20795.7 |
| type ii toxin-antitoxin system hica family toxin | LIP_RS20405 | Not Available | Negative | 1027171 - 1027368 | 7438.27 |
| type ii toxin-antitoxin system hicb family antitoxin | LIP_RS04535 | Not Available | Negative | 1027365 - 1027580 | 7795.17 |
| is1634 family transposase | LIP_RS04540 | Not Available | Negative | 1028635 - 1030296 | 63518.3 |
| is256 family transposase | LIP_RS04545 | Not Available | Positive | 1030582 - 1031886 | 49528.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
