Kingdom
Bacillati
Phylum
Bacillota
Class
Limnochordia
Order
Limnochordales
Family
Limnochordaceae
Genus
Limnochorda
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Limnochordia |
| Order | Limnochordales |
| Family | Limnochordaceae |
| Genus | Limnochorda |
| Species | Limnochorda pilosa |
| Strain | HC45 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
578475 bp
Thymine Count
576902 bp
Guanine Count
1319982 bp
Cytosine Count
1341677 bp
Genome Length
3817036 bp
Protein-coding Genes
3545 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ni/fe-hydrogenase, b-type cytochrome subunit | LIP_RS03035 | P31898 | Negative | 681832 - 682563 | 27277.0 |
| nickel-dependent hydrogenase large subunit | LIP_RS03040 | P18636 | Negative | 682579 - 684294 | 63363.4 |
| hydrogenase small subunit | LIP_RS03045 | P21950 | Negative | 684301 - 685398 | 39001.5 |
| tetr/acrr family transcriptional regulator | LIP_RS03050 | Not Available | Negative | 685724 - 686380 | 23948.5 |
| nad-dependent epimerase/dehydratase family protein | LIP_RS03055 | Not Available | Negative | 686377 - 687375 | 36470.8 |
| murr/rpir family transcriptional regulator | LIP_RS03060 | P37767 | Positive | 687698 - 688615 | 32961.6 |
| aspartate aminotransferase family protein | LIP_RS03065 | O34662 | Positive | 688694 - 690097 | 51110.1 |
| taxi family trap transporter solute-binding subunit | LIP_RS03070 | Not Available | Positive | 690099 - 691058 | 33925.6 |
| duf1850 domain-containing protein | LIP_RS19930 | Not Available | Positive | 691098 - 691490 | 14388.2 |
| trap transporter permease | LIP_RS03080 | Not Available | Positive | 691512 - 693437 | 67098.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
