Kingdom
Bacillati
Phylum
Bacillota
Class
Limnochordia
Order
Limnochordales
Family
Limnochordaceae
Genus
Limnochorda
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Limnochordia |
| Order | Limnochordales |
| Family | Limnochordaceae |
| Genus | Limnochorda |
| Species | Limnochorda pilosa |
| Strain | HC45 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
578475 bp
Thymine Count
576902 bp
Guanine Count
1319982 bp
Cytosine Count
1341677 bp
Genome Length
3817036 bp
Protein-coding Genes
3545 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LIP_RS19095 | Not Available | Negative | 572322 - 572459 | 5378.48 |
| dinb family protein | LIP_RS20310 | Not Available | Negative | 572429 - 572686 | 9437.34 |
| deor/glpr family dna-binding transcription regulator | LIP_RS02565 | O05261 | Positive | 572872 - 573675 | 29167.9 |
| rhamnulokinase family protein | LIP_RS02570 | Q8A1A3 | Negative | 573672 - 575198 | 55053.0 |
| bifunctional rhamnulose-1-phosphate aldolase/short-chain dehydrogenase | LIP_RS02575 | P40747 | Positive | 575423 - 577504 | 75115.2 |
| l-rhamnose isomerase | LIP_RS02580 | Q92S14 | Positive | 577619 - 578791 | 43662.9 |
| sugar abc transporter atp-binding protein | LIP_RS02585 | Q8CK44 | Positive | 578828 - 580366 | 55577.6 |
| abc transporter permease | LIP_RS02590 | B1XEA2 | Positive | 580383 - 581387 | 34438.1 |
| abc transporter permease | LIP_RS02595 | A1JJ53 | Positive | 581380 - 582372 | 34928.8 |
| rhamnose abc transporter substrate-binding protein | LIP_RS02600 | Not Available | Positive | 582454 - 583461 | 35751.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
