Kingdom
Bacillati
Phylum
Bacillota
Class
Limnochordia
Order
Limnochordales
Family
Limnochordaceae
Genus
Limnochorda
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Limnochordia |
| Order | Limnochordales |
| Family | Limnochordaceae |
| Genus | Limnochorda |
| Species | Limnochorda pilosa |
| Strain | HC45 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
578475 bp
Thymine Count
576902 bp
Guanine Count
1319982 bp
Cytosine Count
1341677 bp
Genome Length
3817036 bp
Protein-coding Genes
3545 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | LIP_RS01975 | Not Available | Positive | 431925 - 433271 | 49357.1 |
| carbohydrate abc transporter permease | LIP_RS01980 | P37730 | Positive | 433365 - 434270 | 33429.6 |
| carbohydrate abc transporter permease | LIP_RS01985 | O34518 | Positive | 434270 - 435160 | 32320.4 |
| protein o-glcnacase | LIP_RS01990 | Q2CEE3 | Positive | 435202 - 436638 | 53168.4 |
| group ii intron reverse transcriptase/maturase | LIP_RS01995 | P0A3U0 | Positive | 437211 - 438440 | 47349.4 |
| is1634 family transposase | LIP_RS02000 | Not Available | Positive | 438834 - 440546 | 65194.9 |
| uxaa family hydrolase | LIP_RS02005 | Q1QWP1 | Positive | 440739 - 441020 | 9730.6 |
| uxaa family hydrolase | LIP_RS02010 | Not Available | Positive | 441020 - 442174 | 40924.0 |
| gntr family transcriptional regulator | LIP_RS02015 | Not Available | Positive | 442257 - 442979 | 27040.5 |
| mandelate racemase/muconate lactonizing enzyme family protein | LIP_RS02020 | Q2P1Q3 | Positive | 443025 - 444146 | 39927.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
