Kingdom
Bacillati
Phylum
Bacillota
Class
Limnochordia
Order
Limnochordales
Family
Limnochordaceae
Genus
Limnochorda
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Limnochordia |
| Order | Limnochordales |
| Family | Limnochordaceae |
| Genus | Limnochorda |
| Species | Limnochorda pilosa |
| Strain | HC45 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
578475 bp
Thymine Count
576902 bp
Guanine Count
1319982 bp
Cytosine Count
1341677 bp
Genome Length
3817036 bp
Protein-coding Genes
3545 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trap transporter large permease | LIP_RS01285 | Q312S1 | Negative | 281508 - 282797 | 45154.9 |
| trap transporter small permease | LIP_RS01290 | Q9KR65 | Negative | 282794 - 283357 | 20175.8 |
| dctp family trap transporter solute-binding subunit | LIP_RS01295 | Q9HU18 | Negative | 283354 - 284436 | 39352.2 |
| bile acid:sodium symporter family protein | LIP_RS01300 | Not Available | Negative | 284556 - 285536 | 33693.8 |
| urocanate hydratase | LIP_RS01305 | Q67JH5 | Positive | 285767 - 287443 | 61150.9 |
| glutamate formimidoyltransferase | LIP_RS17325 | Q99XR4 | Positive | 287514 - 289151 | 57389.1 |
| imidazolonepropionase | LIP_RS01315 | Q5WCP8 | Positive | 289164 - 290513 | 47988.0 |
| d-alanine--d-alanine ligase | LIP_RS01320 | A5D2F9 | Positive | 290673 - 291620 | 33430.0 |
| type vii toxin-antitoxin system hept family rnase toxin | LIP_RS01325 | Not Available | Negative | 291634 - 292089 | 16764.9 |
| nucleotidyltransferase domain-containing protein | LIP_RS01330 | Not Available | Negative | 292185 - 292643 | 17100.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
