Kingdom
Bacillati
Phylum
Bacillota
Class
Limnochordia
Order
Limnochordales
Family
Limnochordaceae
Genus
Limnochorda
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Limnochordia |
| Order | Limnochordales |
| Family | Limnochordaceae |
| Genus | Limnochorda |
| Species | Limnochorda pilosa |
| Strain | HC45 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
578475 bp
Thymine Count
576902 bp
Guanine Count
1319982 bp
Cytosine Count
1341677 bp
Genome Length
3817036 bp
Protein-coding Genes
3545 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | LIP_RS00795 | Not Available | Positive | 174818 - 176101 | 46159.2 |
| hypothetical protein | LIP_RS00800 | Not Available | Negative | 176169 - 176729 | 18367.3 |
| response regulator transcription factor | LIP_RS00805 | P9WGN0 | Negative | 176935 - 177693 | 28061.4 |
| hamp domain-containing sensor histidine kinase | LIP_RS00810 | Not Available | Negative | 177671 - 179308 | 59632.5 |
| long-chain fatty acid--coa ligase | LIP_RS00815 | P94547 | Negative | 179398 - 181119 | 63717.1 |
| endonuclease domain-containing protein | LIP_RS00820 | Not Available | Positive | 181520 - 182017 | 19100.6 |
| transketolase | LIP_RS00825 | Q9KAD7 | Positive | 182090 - 184102 | 71949.9 |
| ntp transferase domain-containing protein | LIP_RS00830 | P9WJQ4 | Positive | 184149 - 186047 | 66662.7 |
| glycerophosphodiester phosphodiesterase | LIP_RS00835 | O07592 | Positive | 186049 - 186786 | 26868.2 |
| zip family metal transporter | LIP_RS00840 | Not Available | Negative | 186832 - 187572 | 23968.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
